This is work in progress.

NanoSIMS Data

Data Acquisition

File Formats

.im

Indexed Mesh (*.im)

.nrrd

Nearly Raw Raster Data (*.nrrd)

.tif

Tagged Image File (*.tif)

Metadata

Data Container

Catalog Tool

Preprocessing

Corrections

Dead-Time-Correction

Correct Columns and Rows

Normalization

Registration

Align Slices with Auto-Track

Composites

Indices

Denoising

Maximize NN Performance

PPSIM Tool

Visualization and Exploratory Analysis

Visualization of High Dimensional Data

Color Brewing

Statistics

Feature Engineering

Core Members // Unmixing

Information Complexity

Feature Descriptors

Texture Descriptors

Clustering

kNN

DBScan

…

Clustering Performance

Clustering Entropy

…

Segmentation

Unsupervised vs Supervised

Archetypal Analysis

Features

Classification

Algorithms

Classes of Interest

Interaction

App Desgin User Story

Interactive Clustering

Active Learning Segmentation